Диссертация (1145807), страница 26
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Ordentlich A., Barak D., Kronman C. et al. Exploring the active center of humanacetylcholinesterase with stereomers of an organophosphorus inhibitor with twochiral centers // Biochemistry. – 1999. – V.38. – №10. – P.3055-3066.152. Pedersen A.O., Jacobsen J. Reactivity of the thiol group in human and bovinealbumin at pH 3–9, as measured by exchange with 2,2′-dithiodipyridine // Eur.
J.Biochem. – 1980. – V.106. – P.291-295.153. Pedregosa F., Varoquaux G., Gramfort A. et al. Scikit-learn: Machine learningin Python // Journal of Machine Learning Research. – 2011. – V.12. – P.28252830.154. Pen, J., Beintema, J.J. Nomenclature of esterases // Biochem. J. – 1986. – V.240.– P.933.155. Pérez F., Granger B.E.
IPython: a system for interactive scientific computing //Computing in Science & Engineering. – 2007. – V.9. – №3. – P.21-29.156. Peters Jr. T. All about albumin // Biochemistry, genetics, and medicalapplications. London: Academic Press Ltd. – 1996.157.
Quinlan G.J., Martin G.S., Evans T.W. Albumin: biochemical properties andtherapeutic potential // Hepatology. – 2005. – V.41. – P.1211–1219.158. Radilov A., Rembovskiy V., Rybalchenko I. et al. Handbook of the Toxicologyof Chemical Warfare Agents // Ed Gupta R.C. Oxford: Elsevier Inc., – 2009. –P.69-91.159. Rainsford K.D., Ford N.L., Brooks P.M., Watson H.M. Plasma aspirin esterasesin normal individuals, patients with alcoholic liver disease and rheumatoidarthritis: characterization and the importance of the enzymic components // Eur.J.
Clin. Investg. – 1980. – V.10. – P.413-420.160. Read R.W., Riches J.R., Stevens J.A., Stubbs S.J., Black R.M. Biomarkers oforganophosphorus nerve agent exposure: comparison of phosphylatedbutyrylcholinesterase and phosphylated albumin after oxime therapy // ArchToxicol. – 2010. – V.84. – P.25-36.145161. Reichenwallner J, Hinderberger D.
Using bound fatty acids to disclose thefunctional structure of serum albumin // Biochim Biophys Acta. – 2013. –V.1830. – №12. – P.5382-5393.162. Reiner E., Aldridge W.N., Hoskin C.G. Enzymes HydrolysingOrganophosphorus Compounds // Ellis Horwood Ltd., Chichester, UK. – 1989.163. Roche M., Rondeau P., Singh N.R., Tarnus E., Bourdon E. The antioxidantproperties of serum albumin // FEBS Lett. – 2008. – V.582. – P.1783-1787.164.
Sakurai Y., Ma S.F., Watanabe H. et al. Esterase-like activity of serum albumin:characterization of its structural chemistry using p-nitrophenyl esters assubstrates. // Pharm Res. – 2004. – V.21. – №2. – P.285-292.165. Salvi A., Carrupt P., Mayer J.M., Testa B. Esterase-like activity of human serumalbumin toward prodrug esters of nicotinic acid // Drug. Metab. Dispos. – 1997.– V.25. – P.395-398.166. Sand K.M., Bern M., Nilsen J., Noordzij H.T., Sandlie I., Andersen J.T.Unraveling the Interaction between FcRn and Albumin: Opportunities forDesign of Albumin-Based Therapeutics // Front Immunol.
– 2015. – V.5. –№682.167. Sant’Anna C.M.R., Viana A.D., do Nascimento N.M. A semiempirical study ofacetylcholinehydrolysiscatalyzedbyDrosophilamelanogasteracetylcholinesterase // Bioorg. Chem. – 2006. – V.34. – P.77-89.168. Schmidt N.D., Peschon J.J., Segel I.H. Kinetics of enzymes subject to verystrong product inhibition: Analysis using simplified integrated rate equationsand average velocities // Journal of theoretical biology. – 1983. – Т.100. – №4. –С.
597-611.169. Schomburg D., Schomburg I. Springer Handbook of Enzymes // EC NumberIndex. – 2013.170. Sekula B., Zielinski K., Bujacz A. Crystallographic studies of the complexes ofbovine and equine serum albumin with 3,5-diiodosalicylic acid // Int. J. Biol.Macromol. – 2013. – V.60. – P.316-324.171. Sievers F., Wilm A., Dineen D. et al. Fast, scalable generation of high-qualityprotein multiple sequence alignments using Clustal Omega // Mol Syst Biol.2011. – V.7. – P.539.172.
Silva D., Cortez C.M., Cunha-Bastos J., Louro S.R. Methyl parathion interactionwith human and bovine serum albumin // Toxicol. Lett. – 2004. – V.147. – №1.– P.53-61.173. Sogorb M.A., Alvarez-Escalante C., Carrera V., Vilanova E. An in vitroapproach for demonstrating the critical role of serum albumin in the detoxicationof the carbamate carbaryl at in vivo toxicologically relevant concentrations //Arch Toxicol. – 2007. – V.81.
– P.113-119.174. Sogorb M.A., Vilanova E. Enzymes involved in the detoxification oforganophosphorus, carbamate and pyrethroid insecticides through hydrolysis //Toxicol. Lett. – 2002. – V.128. – P.215-228.175. Sogorb M.A., Vilanova E., Carrera V. Hydrolysis of carbaryl by human serumalbumin // Arch. Toxicol. – 2004. – V.78. – №11. – P.629-634.146176. Sogorb M.A., García-Argüelles S., Carrera V., Vilanova E. Serum albumin is asefficient as paraxonase in the detoxication of paraoxon at toxicologicallyrelevant concentrations // Chem.
Res. Toxicol. – 2008. – V.21. – P.1524-1529.177. Sogorb M.A., Vilanova E. Serum albumins and detoxication of anticholinesterase agents // Chemico-Biological Interactions. – 2010. – V.14. –№187. – P.325–329.178. Somani S.M., Romano J.A. Chemical warfare agents: toxicity at low levels //CRC Press, – 2001.179. Strausberg, R.L., Feingold E.A., Grouse L.H. et al. Generation and initialanalysis of more than 15,000 full-length human and mouse cDNA sequences //Proc Natl Acad Sci USA.
– 2002. – №99. – P.16899–16903.180. Strauss A.W., Bennett C.D., Donohue A.M., Rodkey J.A., Alberts A.W. Ratliver pre-proalbumin: complete amino acid sequence of the pre-piece. Analysisof the direct translation product of albumin messenger RNA // Journal ofBiological Chemistry. – 1977. – V.252. – №19. – P.6846-6855.181. Stryer L., Berg J. M., Tymoczko J. L. Biochemistry // International Edition. –2006.182.
Sugio S., Kashima A., Mochizuki S., Noda M., Kobayashi K. Crystal structureof human serum albumin at 2.5 A resolution // Protein Eng. – 1999. – V.12. –P.439-446.183. Suji G., Sivakami S. Malondialdehyde, a lipid-derived aldehyde alters thereactivity of Cys34 and the esterase activity of serum albumin // Toxicology inVitro. – 2008. – V.22. – №3. – P.618-624.184. Sultatos L.G., Basker K.M., Shao M., Murphy S.D. The interaction of thephosphorothioate insecticides chlorpyrifos and parathion and their oxygenanalogues with bovine serum albumin // Mol. Pharmacol. – 1984. – V.26. – №1.– P.99-104.185. Teodoro M.L., Phillips G.N.
Jr, Kavraki L.E.. Molecular docking: a problemwith thousands of degrees of freedom // Proc. of the 2001 IEEE InternationalConference on Robotics and Automation (ICRA 2001), IEEE press, Seoul,Korea. – 2001. – P.960-966.186. Tildon J.T., Ogilvie J.W. The esterase activity of bovine mercaptalbumin. Thereaction of the protein with p-nitrophenyl acetate // J. Biol. Chem.– 1972. –V.247. – №4. – P.1265-71.187. Tove S.B.
The esterolytic activity of serum albumin // Biochim. Biophys. Acta.– 1962. – V.5. – P.230-235.188. Van Der Walt S., Colbert S.C., Varoquaux G. The NumPy array: a structure forefficient numerical computation // Computing in Science & Engineering. –2011.
– V.13. – №2. – P.22-30.189. Van Gunsteren W.F., Mark A.E. Validation of molecular dynamics simulations// J. Chem. Phys. – 1998. – V.108. – №15. – P.6109-6116.190. Vilanova E., Sogorb M.A. The role of phosphotriesterases in the detoxication oforganophosphorus compounds // Crit. Rev. Toxicol. – 1999. – V.29. – №1. –P.21-57.147191. Walker C.H., Mackness M.I. Esterases: problems of identification andclassification.
// Biochem Pharmacol. – 1983. – V.32. – №22. – P.3265-3269.192. Walker C.H. The classification of esterases which hydrolyse organophosphates:recent developments // Chem Biol Interact. – 1993. – V.87. – №1-3. – P.17-24.193. Wang Z., Ling B., Zhang R., Suo Y., Liu Y., Yu Z,. Liu C. Docking andmolecular dynamics studies toward the binding of new natural phenolic marineinhibitors and aldose reductase // J.
Chem. Inf. Model. – 2009. – V.28. – №2. –P.162-169.194. Watanabe H., Tanase S., Nakajou K., Maruyama T., Kragh-Hansen U., OtagiriM. Role of Arg-410 and Tyr-411 in human serum albumin for ligand bindingand esterase-like activity // Biochem. J. – 2000. – V.20. – №349.
– P.813-819.195. Watanabe T., Narumiya S., Shimizu T., Hayaishi O. Characterization of thebiosynthetic pathway of prostaglandin D2 in human platelet-rich plasma // J.Biol. Chem. – 1982. – V.257. – P.14847-14853.196. Williams A.M., Dickinson R.G. Studies on the reactivity of acyl glucuronidesVI. Modulation of reversible and covalent interaction of diflunisal acylglucuronide and its isomers with human plasma protein in vitro // Biochem.Pharmacol.
– 1994. – V.47. – P.457-467.197. Williams N.H., Harrison J.M., Read R.W., Black R.M. Phosphylated tyrosine inalbumin as a biomarker of exposure to organophosphorus nerve agents // Arch.Toxicol. – 2007. – V.81. – P.627-639198. Wynalda M.A., Fitzpatrick F.A. Albumins stabilize prostaglandin I2 //Prostaglandins. – 1980. – V.20. – P.853-861.199. Xu C., Zhang A., Liu W. Binding of phenthoate to bovine serum albumin andreduced inhibition on acetylcholinesterase // Pest. Biochem. and Physiol. – 2007.– V.88.
– P.176-180.200. Yamaguchi S., Aldini G., Ito S., Morishita N., Shibata T., Vistoli G., Carini M.,Uchida K. Δ12-Prostaglandin J2 as a product and ligand of human serumalbumin: formation of an unusual covalent adduct at His146 // J. Am. Chem.Soc. – 2010. – V.132. – P.824-832.201. Yamasaki K. Albumin-drug interaction and its clinical implication // Biochimicaet Biophysica Acta (BBA)-General Subjects.
– 2013. – V.1830. – №12. –P.5435-5443.202. Yang J., Petersen C.E., Ha C.E., Bhagavan N.V. Structural insights into humanserum albumin-mediated prostaglandin catalysis // Protein Sci. – 2002. – V.11. –P.538-545.203. Yeung D.T., Smith J.R., Sweeney R.E., Lenz D.E., Cerasoli D.M. A gaschromatographic-mass spectrometric approach to examining stereoselectiveinteraction of human plasma proteins with soman // J. Anal. Toxicol. – 2008. –V.32. – №1. – P.86-91.204.
Ylianttila M.S., Pursiainen N.V., Haapalainen A.M., Juffer A.H., Poirier Y.,Hiltunen J.K., Glumoff T. Crystal structure of yeast peroxisomal multifunctionalenzyme: structural basis for substrate specificity of (3R)-hydroxyacyl-CoAdehydrogenase units // J. Mol. Biol. – 2006. – V.358. – №5. – P.1286-1295.148205. Zaidi N., Ajmal M.R., Rabbani G., Ahmad E., Khan R.H.
A comprehensiveinsight into binding of hippuric acid to human serum albumin: a study touncover its impaired elimination through hemodialysis // PLoS One. – 2013. –V.8. – №8.206. Zaloj V., Elber R. Parallel computations of molecular dynamics trajectoriesusing the stochastic path approach // Comput. Phys.