Диссертация (1145883), страница 32
Текст из файла (страница 32)
B. Yeast prions[URE3] and [PSI + ] are diseases // PNAS U. S. A. — 2005. — Vol. 102,no. 30. — Pp. 10575–80.218. Ness F., Aigle M. RTM1: a member of a new family of telomeric repeatedgenes in yeast // Genetics. — 1995. — Vol. 140, no. 3. — Pp. 945–56.219. Newby G. A., Lindquist S. Blessings in disguise: biological benefits ofprion-like mechanisms // Trends in cell biology.
— 2013. — June. — Vol.23, no. 6. — Pp. 251–9.220. Nijkamp J. F. et al. De novo sequencing, assembly and analysis of thegenome of the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D,a model for modern industrial biotechnology // Microbial Cell Factories. —2012. — Vol. 11, no. 1. — P. 36.221. Nizhnikov A. A., Antonets K. S., Inge-Vechtomov S. G., Derkatch I. L.Modulation of efficiency of translation termination in Saccharomyces167cerevisiae: turning nonsense into sense // Prion. — 2014. — Vol. 8, no.3.
— Pp. 247–260.222. Nizhnikov A. A., Magomedova Z. M., Rubel A. A., Kondrashkina A. M.,Inge-Vechtomov S. G., Galkin A. P. [NSI + ] determinant has a pleiotropicphenotypic manifestation that is modulated by SUP35, SUP45, and VTS1genes // Current genetics. — 2012. — Vol. 58, no. 1. — Pp. 35–47.223. Ogle J. M., Ramakrishnan V. Structural insights into translational fidelity //Annu. Rev. Biochem. — 2005.
— Vol. 74. — Pp. 129–177.224. Okonechnikov K., Conesa A., Garcı́a-Alcalde F. Qualimap 2: advancedmulti-sample quality control for high-throughput sequencing data //Bioinformatics. — 2015. — Vol. 32, no. 2. — btv566.225. Okonechnikov K., Golosova O., Fursov M.
Unipro UGENE: a unifiedbioinformatics toolkit // Bioinformatics. — 2012. — Vol. 28, no. 8. —Pp. 1166–7.226. Ono B., Fujimoto R., Ohno Y., Maeda N., Tsuchiya Y., Usui T., Ishino-AraoY. UGA suppressors in Saccharomyces cerevisiae: allelism, action spectraand map positions // Genetics. — 1988. — Vol. 118, no. 1. — Pp. 41–47.227. Ono B.-I., Stewart J. W., Sherman F. Yeast UAA suppressors effective in+ strains: Leucine-inserting suppressors // Journal of molecular biology. —1979a. — Vol. 132, no.
3. — Pp. 507–520.228. Ono B.-I., Stewart J. W., Sherman F. Yeast UAA suppressors effective in+ strains serine-inserting suppressors // Journal of molecular biology. —1979b. — Vol. 128, no. 1. — Pp. 81–100.229. Ono B.-i., Tanaka M., Awano I., Okamoto F., Satoh R., Yamagishi N.,Ishino-Arao Y. Two new loci that give rise to dominant omnipotentsuppressors in Saccharomyces cerevisiae // Current genetics.
— 1989. —Vol. 16, 5-6. — Pp. 323–330.230. Ono B.-I., Tanaka M., Kominami M., Ishino Y., Shinoda S. Recessive UAAsuppressors of the yeast Saccharomyces cerevisiae // Genetics. — 1982. —Vol. 102, no. 4. — Pp. 653–664.231. Ono B.-I., Wills N., Stewart J. W., Gesteland R. F., Sherman F.Serine-inserting UAA suppression mediated by yeast tRNASer // Journalof molecular biology. — 1981. — Vol. 150, no. 3.
— Pp. 361–373.168232. Ono B.-i., Yoshida R., Kamiya K., Sugimoto T. Suppression of terminationmutations caused by defects of the NMD machinery in Saccharomycescerevisiae // Genes & genetic systems. — 2005. — Vol. 80, no. 5. —Pp. 311–316.233. Outten C. E., Albetel A.-N. Iron sensing and regulation in Saccharomycescerevisiae:ironing out the mechanistic details // Current opinion inmicrobiology.
— 2013. — Vol. 16, no. 6. — Pp. 662–668.234. Pagani A., Villarreal L., Capdevila M., Atrian S. The Saccharomycescerevisiae Crs5 metallothionein metal-binding abilities and its role in theresponse to zinc overload // Molecular microbiology. — 2007. — Vol. 63,no. 1. — Pp. 256–269.235. Palmer E., Wilhelm J. M., Sherman F. Phenotypic suppression of nonsensemutants in yeast by aminoglycoside antibiotics // Nature. — 1979.
— Vol.277. — Pp. 148–150.236. Parent S. A., Fenimore C. M., Bostian K. A. Vector systems for theexpression, analysis and cloning of DNA sequence in S. cerevisiae //Yeast. — 1985. — Vol. 1, no. 2. — Pp. 83–138.237. Parenteau J., Durand M., Morin G., Gagnon J., Lucier J.-F., WellingerR. J., Chabot B., Elela S. A. Introns within ribosomal protein genes regulatethe production and function of yeast ribosomes // Cell. — 2011. — Vol.
147,no. 2. — Pp. 320–331.238. Parra G., Bradnam K., Korf I. CEGMA: a pipeline to accurately annotatecore genes in eukaryotic genomes // Bioinformatics. — 2007. — Vol. 23,no. 9. — Pp. 1061–1067.239. Parry E. M., Cox B. The tolerance of aneuploidy in yeast // Geneticalresearch. — 1970. — Vol. 16, no. 03. — Pp. 333–340.240. Patel B.
K., Gavin-Smyth J., Liebman S. W. The yeast global transcriptionalco-repressor protein Cyc8 can propagate as a prion // Nature cell biology. —2009. — Mar. — Vol. 11, no. 3. — Pp. 344–9.241. Patterson G., Day R. N., Piston D. Fluorescent protein spectra // Journal ofcell science.
— 2001. — Vol. 114, Pt 5. — Pp. 837–838.169242. Peterson C. L., Herskowitz I. Characterization of the yeast SWI1, SWI2, andSWI3 genes, which encode a global activator of transcription // Cell. —1992. — Vol. 68, no. 3. — Pp. 573–583.243. Petrova A., Kiktev D., Askinazi O., Chabelskaya S., Moskalenko S.,Zemlyanko O., Zhouravleva G. The translation termination factor eRF1(Sup45p) of Saccharomyces cerevisiae is required for pseudohyphal growthand invasion // FEMS Yeast Research. — 2015. — Vol.
3, October 2014. —Pp. 1–13.244. Pezza J. A., Villali J., Sindi S. S., Serio T. R. Amyloid-associated activitycontributes to the severity and toxicity of a prion phenotype // Naturecommunications. — 2014. — Vol. 5.245. Piper P. W., Wasserstein M. Nonsense suppressors of Saccharomycescerevisiae can be generated by mutation of the tyrosine tRNA anticodon //Nature. — 1976.
— Vol. 262. — Pp. 757–761.246. Planta R. J., Mager W. H. The list of cytoplasmic ribosomal proteinsof Saccharomyces cerevisiae // Yeast. — 1998. — Vol. 14, no. 5. —Pp. 471–477.247. Plocik A. M., Guthrie C. Diverse forms of RPS9 splicing are part of anevolving autoregulatory circuit // PLoS genetics. — 2012. — Vol. 8, no.3. — e1002620.248. Pnueli L., Arava Y. Genome-wide polysomal analysis of a yeast strain withmutated ribosomal protein S9 // BMC genomics. — 2007. — Vol. 8. —P. 285.249. Protchenko O., Ferea T., Rashford J., Tiedeman J., Brown P. O., BotsteinD., Philpott C. C. Three cell wall mannoproteins facilitate the uptake of ironin Saccharomyces cerevisiae // Journal of Biological Chemistry.
— 2001. —Vol. 276, no. 52. — Pp. 49244–49250.250. Prusiner S. B. Novel proteinaceous infectious particles cause scrapie //Science. — 1982. — Vol. 216, no. 4542. — Pp. 136–144.251. Pure G. A., Robinson G. W., Naumovski L., Friedberg E. C. Partialsuppression of an ochre mutation in Saccharomyces cerevisiae by multicopyplasmids containing a normal yeast tRNAGln gene // Journal of molecularbiology. — 1985.
— Vol. 183, no. 1. — Pp. 31–42.170252. Quinlan A. R., Hall I. M. BEDTools: a flexible suite of utilities forcomparing genomic features // Bioinformatics. — 2010. — Vol. 26, no.6. — Pp. 841–2.253. R Core Team R: A Language and Environment for Statistical Computing /R Foundation for Statistical Computing. — Vienna, Austria, 2015. — URL:http://www.r-project.org/.254. Radchenko E., Rogoza T., Khokhrina M., Drozdova P., Mironova L. SUP35expression is enhanced in yeast containing [ISP+ ], a prion form of thetranscriptional regulator Sfp1 // Prion.— 2011.— Vol.
5, no. 4.—Pp. 317–22.255. Ralser M.,Kuhl H. The Saccharomycescerevisiae W303-K6001cross-platform genome sequence: insights into ancestry and physiology ofa laboratory mutt // Open biology. — 2012. — Vol. 2, issue 8. — P. 120093.256. Rébora K., Laloo B., Daignan-Fornier B. Revisiting purine-histidinecross-pathway regulation in Saccharomyces cerevisiae // Genetics.—2005. — Vol. 170, no.
1.257. Rogoza T., Goginashvili A., Rodionova S., Ivanov M., Viktorovskaya O.,Rubel A., Volkov K., Mironova L. Non-Mendelian determinant [ISP+ ] inyeast is a nuclear-residing prion form of the global transcriptional regulatorSfp1 // PNAS U. S .A.
— 2010. — Vol. 107, no. 23. — Pp. 10573–7.258. Romanova N. V., Chernoff Y. O. Hsp104 and prion propagation // Proteinand peptide letters. — 2009. — Vol. 16, no. 6. — Pp. 598–605.259. Rose M., Winston F. Identification of a Ty insertion within the codingsequence of the S. cerevisiae URA3 gene // Molecular & general genetics. —1984.