Диссертация (1145766), страница 20
Текст из файла (страница 20)
68-71.139. Kinzy T.G., Ripmaster T.L., Woolford J.L. Jr. Multiple genes encode thetranslation elongation factor EF-1 gamma in Saccharomyces cerevisiae // NucleicAcids Res. 1994. V. 22. P. 2703- 2707.140. Kirkland P.A., Reidy M., Masison D.C.
Functions of yeast Hsp40 chaperoneSis1p dispensable for prion propagation but important for prion curing and protectionfrom prion toxicity // Genetics. 2011. V. 188. P. 565-577.141. Kitamura E., Tanaka K., Komoto S., Kitamura Y., Antony S., Tanaka T.U.Kinetochores generate microtubules with distal plus ends: their roles and limitedlifetime in mitosis // Dev.
Cell. 2010. V. 18. P. 248-259.142. Kochneva-Pervukhova N.V., Poznyakovski A.I., Smirnov V.N., Ter-Avanesyan122M.D. C-terminal truncation of the Sup35 protein increases the frequency of de novogeneration of a prion-based [PSI+] determinant in Saccharomyces cerevisiae // Curr.Genet. 1998. V. 34. P. 146-151.143. Kodama H., Ito K., Nakamura Y. The role of N-terminal domain oftranslational release factor eRF3 for the control of functionality and stability in S.cerevisiae // Genes Cell. 2007. V. 12.
P. 639-650.144. Kong J. and Liebhaber S.A. A cell type-restricted mRNA surveillance pathwaytriggered by ribosome extension into the 3' untranslated region // Nat. Struct. Mol.Biol. 2007. V. 14. P. 670-676.145. Kozak M. The scanning model for translation: an Update // The Journal of CellBiology. 1989. V. 108. P. 229-241.146.
Kramer E.B. and Farabaugh P.J. The frequency of translational misreadingerrors in E. coli is largely determined by tRNA competition // RNA. 2007. V. 13. P.87-96.147. Kryndushkin D.S., Alexandrov I.M.m Ter-Avanesyan M.D., Kushnirov V.V.Yeast [PSI+] prion aggregates are formed by small Sup35 polymers fragmented byHsp104 //J. Biol. Chem. 2003. V. 278. P.
49636-49643.148. Kuchino Y., Beier H., Akita N., Nishimura S. Natural UAG suppressorglutamine tRNA is elevated in mouse cells infected with Moloney murine leukemiavirus // Proc. Natl. Acad. Sci. USA. 1987. V. 84. P. 2668-2672.149. Kuhlberger R., Piepersberger W., Pretzet A., Buckel B., Bock A. Alteration ofribosomal protein L6 in gentamicin-resistant strain of E. coli: effects on fidelity ofprotein synthesis // Biochemistry. 1979.
V. 18. P. 187-193.150. Kunkel T.A. and Bebenek K. DNA replication fidelity // Annu. Rev. Biochem.2000. V. 69. P. 497-529.123151. Kushnirov V.V., Alexandrov I.M., Mitkevich O.V., Shkundina I.S., TerAvanesyan M.D. Purification and analysis of prion and amyloid aggregates //Methods. 2006. V. 39. P. 50-55.152.
Kushnirov V.V. and Ter-Avanesyan M.D. Structure and replication of yeastprions // Cell. 1998. V. 94. 13-16.153. Kushnirov V.V., Ter-Avanesyan M.D., Telckov M.V., Surguchov A.P., SmirnovV.N., Inge-Vechtomov S.G. Nucleotide sequence of the SUP2 (SUP35) gene ofSaccharomyces cerevisiae // Gene. 1988. V. 66. P. 45-54.154.
Kushnirov V.V., Kryndushkin D.S., Boguta M., Smirnov V.N., Ter-AvanesyanM.D. Chaperones that cure yeast artificial [PSI+] and their prion-specific effects //Curr. Biol. 2000. V. 10. P. 1443-1446.155. Kushnirov V.V., Vishnevskaya A.B., Alexandrov I.M., Ter-Avanesyan M.D.Prion and nonprion amyloids: a comparison inspired by the yeast Sup35 protein //Prion.
2007. V. 1. P. 179-184.156. Kwon A.T., Arenillas D.J., Worsley Hunt R., Wasserman W.W. oPOSSUM-3:advancedanalysis of regulatory motif over-representation across genes or ChIP-Seqdatasets // G3 (Bethesda). 2012. V. 2. P. 987–1002.157. Laughrea M., Latulippe J., Filion A.M., Boulet L. Mistranslation in twelveEscherichia coli ribosomal proteins. Cysteine misincorporation at neutral amino acidresidues other than tryptophan // Eur. J. Biochem. 1987. V. 16.
P. 59-64.158. Lecompte O., Ripp R., Thierry J.C., Moras D., Poch O. Comparative analysisof ribosomal proteins in complete genomes: an example of reductive evolution at thedomain scale // Nucleic Acids Res. 2002. V. 30. P. 5382-5390.159. Le Goff X., Philippe M., Jean-Jean O. Overexpression of human release factor1 alone has an antisuppressor effect in human cells // Mol. Cell Biol.
1997. V. 17. P.3164-3172.124160. Le Goff C., Zemlyanko O., Moskalenko S., Berkova N., Inge-Vechtomov S.,Philippe M., Zhouravleva G. Mouse GSPT2, but not GSPT1, can substitute for yeasteRF3 in vivo // Genes Cell. 2002. V. 7. P. 1043-1057.161. Le Sourd F., Boulben S., Le Bouffant R., Cormier P., Morales J., Belle R.,Mulner-Lorillon O.
eEF1B: At the dawn of the 21st century // Biochim. Biophys.Acta. 2006. V. 1759. P. 13-31.162. Lin J.P., Aker M., Sitney K.C., Mortimer R.K. First position wobble in codonanticodon pairing: amber suppression by a yeast glutamine tRNA // Gene. 1986. V.49.
P. 383-388.163. Liebman S.W., Chernoff Y.O., Liu R. The accuracy center of a eukaryoticribosome // Biochem. Cell. Biol. 1995.V. 73. P. 1141-1149.164. Liebman S.W. and Chernoff Y.O. Prions in yeast // Genetics. 2012. V. 191. P.1041-1072.165. Liebman S.W. and Sherman F. Extrachromosomal [PSI+] determinantsuppresses nonsense mutations in yeast // J. Bacteriol. 1979. V.
139. P. 1068-1071.166. Liu R. and Liebman S.W. A translational fidelity mutation in the universallyconserved sarcin/ricin domain of 25S yeast ribosomal RNA // RNA. 1996. V. 2. P.254-263.167. Liu J.J., Sondheimer N., Lindquist S.L. Changes in the middle region of Sup35profoundly alter the nature of epigenetic inheritance for the yeast prion [PSI+] // Proc.Natl. Acad. Sci. USA. 2002. V. 99. P. 16446-16453.168. Livak K.J. and Schmittgen T.D.
Analysis of relative gene expression data usingreal-time quantitative PCR and the 2-ΔΔCT Method // Methods. 2001. V. 25. P. 402–408.169. Loenarz C., Sekirnik R., Thalhammer A., Ge W., Spivakovsky E., Mackeen125M.M., McDonough M.A., Cockman M.E., Kessler B.M., Ratcliffe P.J., Wolf A.,Schofield C.J. Hydroxylation of the eukaryotic ribosomal decoding center affectstranslational accuracy // Proc. Natl. Acad.
Sci. USA. 2014. V. 111. P. 4019-4024.170. Long E.O. and Dawid I.B. Repeated genes in eukaryotes // Annu. Rev.Biochem. 1980. V. 49. P. 727-764.171. Maderazo A.B., He F., Mangus D.A., Jacobson A. Upf1p control of nonsensemRNA translation is regulated by Nmd2p and Upf3p // Mol. Cell. Biol. 2000. V. 20.P. 4591-4603.172. Marintchev A. and Wagner G. Translation initiation: structures, mechanismsand evolution // Quarterly Reviews of Biophysics.
2004. V. 37. P. 197-284.173. McCready S.J. and McLaughlin C.S. A comparison of small circular DNAmolecules in psi+ and psi- strains of Saccharomyces cerevisiae // Biochim. Biophys.Acta. 1977. V. 479. P. 119-121.174. Murgola E.J. tRNA, suppression, and the code // Annu. Rev. Genet. 1985.
V.19. P. 57-80.175. Murgola E.J. and Yanofsky C. Selection for new amino acids at position 211 ofthe tryptophan synthetase alpha chain of Escherichia coli // J. Mol. Biol. 1974. V. 86.P. 775-784.176. Murgola E.J. and Yanofsky C. Structural interactions between amino acidresidues at positions 22 and 211 in the tryptophan synthetase alpha chain ofEscherichia coli // J.
Bacteriol. 1974. V. 117. P. 444-448.177. Murgola E.J. and Yanofsky C. Suppression of glutamic acid codons by mutantglycine transfer ribonucleic acid // J. Bacteriol. 1974. V. 117. P. 439-443.178. Melnikov S., Ben-Shem A., Garreau de Loubresse N., Jenner L., Yusupova G.,Yusupov M. One core, two shells: bacterial and eukaryotic ribosomes // Nat. Struct.126Mol. Biol. 2012. V. 19. P. 560-567.179. Michelitsch M.D. and Weissman J.S. A census of glutamine/asparagine-richregions: implications for their conserved function and the prediction of novel prions //Proc. Natl.
Acad. Sci. U.S.A. 2000. V. 97. P. 11910-11915.180. Mironova L.N., Samsonova M.G., Zhouravleva G.A., Kulikov V.N., SoomM.J. Reversions to respiratory competence of omnipotent sup45 suppressor mutantsmay be caused by secondary sup45 mutations // Curr. Genet. 1995. V. 27. P.
195-200.181. Moskalenko S.E., Chabelskaya S.V., Inge-Vechtomov S.G., Philippe M.,Zhouravleva G.A. Viable nonsense mutants for the essential gene SUP45 ofSaccharomyces cerevisiae // BMC Mol. Biol. 2003. V. 4. P. 1-14.182. Nakamura Y. and Ito K. tRNA mimicry in translation termination and beyond //Wiley Interdiscip. Rev. RNA. 2011. V. 2. P. 647–668.183. Namy O., Duchateau-Nguyen G., Rousset J.
Translational readthrough of thePDE2 stop codon modulates camp levels in Saccharomyces cerevisiae // Mol.Microbiol. 2002. V. 43. P. 641-652.184. Newnam G.P., Wegrzyn R.D., Lindquist S.L., Chernoff Y.O. Antagonisticinteractions between yeast chaperones Hsp104 and Hsp70 in prion curing // Mol.Cell. Biol. 1999. V. 19.
P. 1325-1333.185. Nizhnikov A.A., Magomedova Z.M., Rubel A.A., Kondrashkina A.M.,IngeVechtomov S.G., Galkin A.P. [NSI+] determinant has a pleiotropic phenotypicmanifestation that is modulated by SUP35, SUP45, and VTS1 genes // Curr. Genetics.2012.