Диссертация (1140107), страница 25
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A., Mehler M. F. Emerging roles of non-coding RNAs in brainevolution, development, plasticity and disease //Nature Reviews Neuroscience. – 2012.– Т. 13. – №. 8. – С. 528. doi: 10.1038/nrn3234.222) R Core Team (2016). R: A language and environment for statistical computing. RFoundationforStatisticalComputing,Vienna,Austria.Режимдоступа:https://www.R-project.org/223) Reck M. et al.
Stool metatranscriptomics: A technical guideline for mRNAstabilisation and isolation //BMC genomics. – 2015. – Т. 16. – №. 1. – С. 494. doi:10.1186/s12864-015-1694-y.224) Richard M. L. et al. Mucosa-associated microbiota dysbiosis in colitis associatedcancer //Gut microbes. – 2017. – С. 1-12. doi: 10.1080/19490976.2017.1379637225) Richterich P. Estimation of errors in “raw” DNA sequences: a validation study//Genome Research. – 1998. – Т. 8. – №. 3.
– С. 251-259. doi:10.1101/gr.8.3.251.149226) Ricotta C., Burrascano S. Beta diversity for functional ecology //Preslia. – 2008. –Т. 80. – №. 1. – С. 61-72.227) Ríos-Covián D. et al. Intestinal short chain fatty acids and their link with diet andhuman health //Frontiers in microbiology.
– 2016. – Т. 7. – С. 185.doi:10.3389/fmicb.2016.00185.228) Ritari J. et al. Improved taxonomic assignment of human intestinal 16S rRNAsequences by a dedicated reference database //BMC genomics. – 2015. – Т. 16. – №. 1.– С. 1056. doi: 10.1186/s12864-015-2265-y229) Rodrigues Hoffmann A. The cutaneous ecosystem: the roles of the skinmicrobiome in health and its association with inflammatory skin conditions in humansand animals //Veterinary dermatology. – 2017. – Т. 28. – №. 1. – С. 60.
doi:10.1111/vde.12408.230) Rosignoli P. et al. Protective activity of butyrate on hydrogen peroxide-inducedDNA damage in isolated human colonocytes and HT29 tumour cells //Carcinogenesis. –2001. – Т. 22. – №. 10. – С. 1675-1680.231) Rousk J., Bengtson P. Microbial regulation of global biogeochemical cycles//Frontiers in microbiology. – 2014.
– Т. 5. – С. 103. doi: 10.3389/fmicb.2014.00103232) Rutherford N. J. et al. Prion-like transmission of α-synuclein pathology in thecontext of an NFL null background //Neuroscience letters. – 2017. – Т. 661. – С. 114120. doi: 10.1016/j.neulet.2017.09.054.233) Rutherford S. T., Bassler B. L. Bacterial quorum sensing: its role in virulence andpossibilities for its control //Cold Spring Harbor perspectives in medicine. – 2012. – Т.2. – №. 11. – С. A012427. doi: 10.1101/cshperspect.a012427234) Saedisomeolia A., Ashoori M. Riboflavin in Human Health: A Review of CurrentEvidences //Advances in food and nutrition research.
– Academic Press, 2018. – Т. 83.– С. 57-81. doi: 10.1016/bs.afnr.2017.11.002235) Saint-Georges-Chaumet Y. et al. Targeting microbiota-mitochondria inter-talk:Microbiota control mitochondria metabolism //Cellular and Molecular Biology. – 2015.– Т. 61. – №. 4. – С. 121-124. doi : 10.14715/cmb/2015.61.4.20236) Saltykova I. V. et al. Biliary Microbiota, Gallstone Disease and Infection with150Opisthorchis felineus //PLoS neglected tropical diseases.
– 2016. – Т. 10. – №. 7. – С.e0004809. doi:10.1371/journal.pntd.0004809.237) Santarelli A. et al. Oral ulcer by Sphingomonas paucimobilis: first report//International journal of oral and maxillofacial surgery. – 2016. – Т. 45. – №. 10. – С.1280-1282. doi: 10.1016/j.ijom.2016.07.006238) Santoro A. et al. Gut microbiota changes in the extreme decades of human life: afocus on centenarians //Cellular and Molecular Life Sciences. – 2018.
– Т. 75. – №. 1. –С. 129-148. doi: 10.1007/s00018-017-2674-y239) Sato K., Sakakibara Y. MetaVelvet-SL: an extension of the Velvet assembler to ade novo metagenomic assembler utilizing supervised learning //DNA research. – 2014.– Т. 22. – №. 1. – С. 69-77. doi: 10.1093/dnares/dsu041.240) Scharschmidt T. C. et al. Commensal microbes and hair follicle morphogenesiscoordinately drive Treg migration into neonatal skin //Cell host & microbe. – 2017. – Т.21. – №.
4. – С. 467-477. e5. doi: 10.1016/j.chom.2017.03.001241) Scheperjans F. et al. Gut microbiota are related to Parkinson's disease and clinicalphenotype //Movement Disorders. – 2015. – Т. 30. – №. 3. – С. 350-358. doi:10.1002/mds.26069242) Schicho R. et al. Hydrogen sulfide is a novel prosecretory neuromodulator in theGuinea-pig and human colon //Gastroenterology. – 2006. – Т. 131. – №. 5. – С. 15421552. doi: 10.1053/j.gastro.2006.08.035243) Schmidt T.
S. B., Rodrigues J. F. M., Von Mering C. Ecological consistency ofSSU rRNA-based operational taxonomic units at a global scale //PLoS computationalbiology. – 2014. – Т. 10. – №. 4. – С. e1003594. doi:10.1371/journal.pcbi.1003594.244) Schwarz E. et al. Analysis of microbiota in first episode psychosis identifiespreliminary associations with symptom severity and treatment response //Schizophreniaresearch. – 2017. doi: 10.1016/j.schres.2017.04.017245) Sender R., Fuchs S., Milo R.
Revised estimates for the number of human andbacteria cells in the body //PLoS biology. – 2016. – Т. 14. – №. 8. – С. e1002533. Doi:10.1371/journal.pbio.1002533246) Shannon C. E. A mathematical theory of communication (parts I and II) //Bell151System Tech. J. – 1948.
– Т. 27. – С. 379-423.247) Shannon P. et al. Cytoscape: a software environment for integrated models ofbiomolecular interaction networks //Genome research. – 2003. – Т. 13. – №. 11. – С.2498-2504. doi:10.1101/gr.1239303.248) Sharpton T. J. An introduction to the analysis of shotgun metagenomic data//Frontiers in plant science. – 2014. – Т.
5. – С. 209. doi: 10.3389/fpls.2014.00209249) Shen C. H. et al. Association between tuberculosis and Parkinson disease: anationwide, population-based cohort study //Medicine. – 2016. – Т. 95. – №. 8.doi:10.1097/MD.0000000000002883.250) Shen Y. et al. Analysis of gut microbiota diversity and auxiliary diagnosis as abiomarker in patients with schizophrenia: A cross-sectional study //Schizophreniaresearch. – 2018. doi: 10.1016/j.schres.2018.01.002.251) Shih D. Q. et al. Microbial induction of inflammatory bowel disease associatedgene TL1A (TNFSF15) in antigen presenting cells //European journal of immunology. –2009.
– Т. 39. – №. 11. – С. 3239-3250. doi:10.1002/eji.200839087.252) Simpson E. H., Sutherland G., Blackwell D. E. Nature //Measurement of diversity.– 1949. – Т. 163. – С. 688.253) Sivaprakasam S. et al. Cell-Surface and Nuclear Receptors in the Colon as Targetsfor Bacterial Metabolites and Its Relevance to Colon Health //Nutrients.
– 2017. – Т. 9.– №. 8. – С. 856. doi: 10.3390/nu9080856254) Snider E. J., Freedberg D. E., Abrams J. A. Potential role of the microbiome inBarrett’s esophagus and esophageal adenocarcinoma //Digestive diseases and sciences.– 2016. – Т. 61. – №. 8. – С. 2217-2225. doi: 10.1007/s10620-016-4155-9255) Sobko T. et al. Generation of NO by probiotic bacteria in the gastrointestinal tract//Free Radical Biology and Medicine. – 2006. – Т. 41. – №. 6.
– С. 985-991. doi:10.1016/j.freeradbiomed.2006.06.020256) Sokol H. et al. Specificities of the intestinal microbiota in patients withinflammatory bowel disease and Clostridium difficile infection //Gut microbes. – 2017.– С. 1-6. doi: 10.1080/19490976.2017.1361092257) Soret R. et al. Short-chain fatty acids regulate the enteric neurons and control152gastrointestinal motility in rats //Gastroenterology. – 2010. – Т.
138. – №. 5. – С. 17721782. e4. doi: 10.1053/j.gastro.2010.01.053.258) Stenman L. K., Burcelin R., Lahtinen S. Establishing a causal link between gutmicrobes, body weight gain and glucose metabolism in humans–towards treatment withprobiotics //Beneficial microbes. – 2016. – Т. 7.
– №. 1. – С. 11-22. doi:10.3920/BM2015.0069259) Stiemsma L. T. et al. The hygiene hypothesis: current perspectives and futuretherapies //ImmunoTargets and therapy. – 2015. – Т. 4. – С. 143. doi:10.2147/ITT.S61528260) Stilling R. M. et al. Friends with social benefits: host-microbe interactions as adriver of brain evolution and development? //Frontiers in cellular and infectionmicrobiology. – 2014.
– Т. 4. – С. 147. doi: 10.3389/fcimb.2014.00147261) Suau A. et al. Direct analysis of genes encoding 16S rRNA from complexcommunities reveals many novel molecular species within the human gut //Applied andenvironmental microbiology. – 1999. – Т. 65. – №. 11. – С. 4799-4807.262) Sudo N. et al. Postnatal microbial colonization programs the hypothalamic–pituitary–adrenal system for stress response in mice //The Journal of physiology. –2004.
– Т. 558. – №. 1. – С. 263-275. doi:10.1113/jphysiol.2004.063388.263) Sullivan A. et al. The microbiome and the pathophysiology of asthma//Respiratory research. – 2016. – Т. 17. – №. 1. – С. 163. doi: 10.1186/s12931-0160479-4264) Tarasova T. V. et al. The role of alpha-synuclein in the development of thedopaminergic neurons in the substantia nigra and ventral tegmental area //DokladyBiological Sciences. – Pleiades Publishing, 2016. – Т.
466. – №. 1. – С. 5-7. doi:10.1134/S0012496616010117265) Tarn J. et al. Identification of free-living and particle-associated microbialcommunities present in hadal regions of the Mariana Trench //Frontiers inmicrobiology. – 2016. – Т. 7. – С. 665. doi: 10.3389/fmicb.2016.00665266) Telford G. et al. The Pseudomonas aeruginosaQuorum-Sensing Signal MoleculeN(3-Oxododecanoyl)-l-Homoserine Lactone Has Immunomodulatory Activity //Infection153and immunity. – 1998. – Т. 66. – №. 1. – С. 36-42.267) Thursby E., Juge N.
Introduction to the human gut microbiota //BiochemicalJournal. – 2017. – Т. 474. – №. 11. – С. 1823-1836. doi:10.1042/BCJ20160510.268) Tomé C. M. L. et al. Inflammation and α-Synuclein’s Prion-like Behavior inParkinson's disease—is there a link? //Molecular neurobiology. – 2013. – Т. 47.
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